Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB63581.1 | AKB63768.1 | MSMAS_0385 | MSMAS_0572 | GDP-mannose mannosyl hydrolase. | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 0.856 |
| AKB63581.1 | AKB63960.1 | MSMAS_0385 | MSMAS_0764 | GDP-mannose mannosyl hydrolase. | 3'-to-5' exoribonuclease RNase R. | 0.959 |
| AKB63581.1 | AKB64159.1 | MSMAS_0385 | MSMAS_0963 | GDP-mannose mannosyl hydrolase. | Phosphomethylpyrimidine kinase; Thiamin-phosphate synthase ThiN. | 0.780 |
| AKB63581.1 | AKB65281.1 | MSMAS_0385 | MSMAS_2085 | GDP-mannose mannosyl hydrolase. | Ribonuclease PH. | 0.883 |
| AKB63581.1 | AKB65344.1 | MSMAS_0385 | MSMAS_2148 | GDP-mannose mannosyl hydrolase. | Cold-shock DEAD-box protein A. | 0.856 |
| AKB63581.1 | csl4 | MSMAS_0385 | MSMAS_2808 | GDP-mannose mannosyl hydrolase. | Exosome complex RNA-binding protein Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.860 |
| AKB63581.1 | flpA | MSMAS_0385 | MSMAS_3075 | GDP-mannose mannosyl hydrolase. | Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.856 |
| AKB63581.1 | pyrG | MSMAS_0385 | MSMAS_1214 | GDP-mannose mannosyl hydrolase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.850 |
| AKB63581.1 | rrp4 | MSMAS_0385 | MSMAS_2086 | GDP-mannose mannosyl hydrolase. | Putative exosome complex RNA-binding protein 1; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.840 |
| AKB63581.1 | rrp42 | MSMAS_0385 | MSMAS_2084 | GDP-mannose mannosyl hydrolase. | Putative exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.883 |
| AKB63768.1 | AKB63581.1 | MSMAS_0572 | MSMAS_0385 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | GDP-mannose mannosyl hydrolase. | 0.856 |
| AKB63768.1 | AKB63960.1 | MSMAS_0572 | MSMAS_0764 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 3'-to-5' exoribonuclease RNase R. | 0.641 |
| AKB63768.1 | AKB65281.1 | MSMAS_0572 | MSMAS_2085 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Ribonuclease PH. | 0.600 |
| AKB63768.1 | AKB65344.1 | MSMAS_0572 | MSMAS_2148 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Cold-shock DEAD-box protein A. | 0.907 |
| AKB63768.1 | csl4 | MSMAS_0572 | MSMAS_2808 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Exosome complex RNA-binding protein Csl4; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs. | 0.540 |
| AKB63768.1 | pyrG | MSMAS_0572 | MSMAS_1214 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.502 |
| AKB63768.1 | rrp4 | MSMAS_0572 | MSMAS_2086 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Putative exosome complex RNA-binding protein 1; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome. | 0.532 |
| AKB63768.1 | rrp42 | MSMAS_0572 | MSMAS_2084 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Putative exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site. | 0.526 |
| AKB63960.1 | AKB63581.1 | MSMAS_0764 | MSMAS_0385 | 3'-to-5' exoribonuclease RNase R. | GDP-mannose mannosyl hydrolase. | 0.959 |
| AKB63960.1 | AKB63768.1 | MSMAS_0764 | MSMAS_0572 | 3'-to-5' exoribonuclease RNase R. | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 0.641 |
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