STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63586.1Hypothetical protein. (415 aa)    
Predicted Functional Partners:
AKB63587.1
Putative methanogenesis marker protein 5.
 
    0.986
AKB63584.1
Putative methanogenesis marker protein 7.
 
     0.985
AKB63588.1
Putative methanogenesis marker protein 6.
 
     0.984
AKB63585.1
Putative methanogenesis marker protein 17.
 
     0.981
AKB63589.1
Putative methanogenesis marker protein 3; Belongs to the UPF0288 family.
 
     0.960
AKB63590.1
Methyl coenzyme M reductase system component A2.
 
     0.954
AKB63583.1
Alkylhydroperoxidase AhpD family core domain protein.
 
     0.929
AKB63390.1
Hypothetical protein.
 
    0.783
AKB63267.1
Methyl coenzyme M reductase operon protein C.
 
     0.779
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
     
 0.754
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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