STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63591.1Soluble P-type ATPase-like phosphatase. (266 aa)    
Predicted Functional Partners:
AKB63589.1
Putative methanogenesis marker protein 3; Belongs to the UPF0288 family.
 
     0.654
AKB63590.1
Methyl coenzyme M reductase system component A2.
 
     0.619
AKB63585.1
Putative methanogenesis marker protein 17.
 
     0.599
AKB63584.1
Putative methanogenesis marker protein 7.
 
     0.563
AKB63583.1
Alkylhydroperoxidase AhpD family core domain protein.
 
     0.557
AKB63588.1
Putative methanogenesis marker protein 6.
 
     0.546
AKB63592.1
Hypothetical protein.
       0.514
AKB63587.1
Putative methanogenesis marker protein 5.
 
     0.504
AKB63264.1
Methyl coenzyme M reductase associated protein / Fe-S oxidoreductase, related to NifB/MoaA family.
  
     0.485
mtrC
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
     0.473
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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