AKB63643.1 protein (Methanosarcina mazei) - STRING interaction network

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Score

AKB63643.1

Translation initiation factor SUI1-related protein; Belongs to the SUI1 family. (102 aa)

Predicted Functional Partners:

rpl2

0.985

rps3

0.974

rps17

0.957

rps4e

0.951

rps24e

0.950

rps14

0.942

rps6e

0.936

rps17e

0.932

rps5

0.932

rps8

0.930

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB63643.1	rpl2	MSMAS_0447	MSMAS_2557	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.985
AKB63643.1	rps14	MSMAS_0447	MSMAS_2546	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.942
AKB63643.1	rps17	MSMAS_0447	MSMAS_2551	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.957
AKB63643.1	rps17e	MSMAS_0447	MSMAS_0112	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.932
AKB63643.1	rps24e	MSMAS_0447	MSMAS_0710	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.950
AKB63643.1	rps3	MSMAS_0447	MSMAS_2554	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.974
AKB63643.1	rps4e	MSMAS_0447	MSMAS_2548	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.951
AKB63643.1	rps5	MSMAS_0447	MSMAS_2540	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.932
AKB63643.1	rps6e	MSMAS_0447	MSMAS_2239	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.936
AKB63643.1	rps8	MSMAS_0447	MSMAS_2545	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	SSU ribosomal protein S15Ae (S8p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.930
rpl2	AKB63643.1	MSMAS_2557	MSMAS_0447	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.	0.985
rpl2	rps14	MSMAS_2557	MSMAS_2546	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.999
rpl2	rps17	MSMAS_2557	MSMAS_2551	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpl2	rps17e	MSMAS_2557	MSMAS_0112	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rpl2	rps24e	MSMAS_2557	MSMAS_0710	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rpl2	rps3	MSMAS_2557	MSMAS_2554	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.999
rpl2	rps4e	MSMAS_2557	MSMAS_2548	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
rpl2	rps5	MSMAS_2557	MSMAS_2540	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
rpl2	rps6e	MSMAS_2557	MSMAS_2239	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl2	rps8	MSMAS_2557	MSMAS_2545	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S15Ae (S8p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999