STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63644.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AKB63645.1
Hypothetical protein; Involved in DNA damage repair; Belongs to the Nre family.
       0.809
AKB65375.1
Hypothetical protein.
  
     0.548
AKB64967.1
Hypothetical protein.
  
     0.525
AKB63643.1
Translation initiation factor SUI1-related protein; Belongs to the SUI1 family.
       0.508
AKB66035.1
CoB--CoM heterodisulfide reductase 2 subunit E.
  
     0.502
AKB63861.1
Hypothetical protein.
 
     0.496
AKB66241.1
Biotin synthase-related enzyme.
 
     0.493
AKB63986.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
  
     0.477
AKB65534.1
Chorismate mutase I.
 
     0.476
AKB63914.1
Hypothetical protein.
 
     0.470
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.