STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63657.1Coenzyme F390 synthetase. (452 aa)    
Predicted Functional Partners:
AKB63664.1
Aldehyde dehydrogenase.
  
 0.744
AKB64476.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.744
AKB65555.1
Succinate-semialdehyde dehydrogenase [NADP+].
  
 0.744
AKB65984.1
Phenylacetic acid degradation protein paaI.
 
  
 0.585
AKB64333.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Includes in-frame UAG codon.
  
 
 0.519
AKB63832.1
Acetolactate synthase small subunit.
 
   0.469
AKB64552.1
Iron-sulfur cluster binding protein.
 
  
 0.437
AKB63656.1
Hypothetical protein.
       0.405
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.