STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63661.1Transcriptional regulator, ArsR family. (118 aa)    
Predicted Functional Partners:
AKB65650.1
Transcriptional regulator, ArsR family.
  
     0.665
AKB63847.1
Transcriptional regulator, ArsR family.
  
     0.640
AKB63455.1
Transcriptional regulator.
 
   
 0.580
AKB64676.1
Transcriptional regulator, ArsR family.
 
   
 0.520
AKB63424.1
Methanol methyltransferase corrinoid protein.
     
 0.473
AKB63662.1
Dolichol-P-glucose synthetase.
       0.430
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.