STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63663.1Hypothetical protein. (720 aa)    
Predicted Functional Partners:
AKB63666.1
Phytoene dehydrogenase.
 
    0.904
AKB63670.1
Hypothetical protein.
 
     0.773
AKB65339.1
Ferredoxin.
   
    0.762
AKB65668.1
SAM-dependent methyltransferase.
 
    0.756
AKB63662.1
Dolichol-P-glucose synthetase.
 
  
 0.648
AKB63247.1
Hypothetical protein.
  
     0.603
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.573
AKB66474.1
Haloacid dehalogenase superfamily protein.
 
     0.507
AKB65930.1
Hypothetical protein.
 
  
 0.497
AKB63939.1
N-acetyltransferase.
  
    0.475
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.