STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63670.1Hypothetical protein. (528 aa)    
Predicted Functional Partners:
AKB63663.1
Hypothetical protein.
 
     0.773
AKB63666.1
Phytoene dehydrogenase.
 
     0.757
AKB63671.1
Molybdopterin converting factor small subunit.
 
     0.619
AKB63662.1
Dolichol-P-glucose synthetase.
 
     0.596
cofC
2-phospho-L-lactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.554
AKB63247.1
Hypothetical protein.
  
     0.528
AKB63672.1
Molybdopterin biosynthesis MoeA protein.
       0.522
AKB63858.1
Oligosaccharyl transferase.
 
     0.514
AKB63859.1
Oligosaccharyl transferase.
 
     0.507
AKB64180.1
Flagella-related protein FlaJ.
  
     0.502
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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