STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63723.1Chromosome segregation ATPase. (518 aa)    
Predicted Functional Partners:
AKB65225.1
Hypothetical protein.
  
     0.661
AKB65686.1
Hypothetical protein.
  
     0.572
AKB63524.1
Hypothetical protein.
  
     0.529
AKB66237.1
Hypothetical protein.
  
     0.520
AKB63441.1
Surface layer protein B.
  
     0.497
AKB63354.1
Hypothetical protein.
  
     0.493
AKB64414.1
Hypothetical protein.
  
     0.492
AKB63638.1
Hypothetical protein.
  
     0.485
AKB65223.1
Hypothetical protein.
  
     0.482
AKB63582.1
Matrixin.
 
     0.478
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.