STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63738.1Mobile element protein. (219 aa)    
Predicted Functional Partners:
AKB63739.1
Hypothetical protein.
 
     0.903
AKB63452.1
Mobile element protein.
 
     0.684
AKB63948.1
Mobile element protein.
 
     0.684
AKB64349.1
Mobile element protein.
 
     0.684
AKB64651.1
Mobile element protein.
 
     0.684
AKB65007.1
Mobile element protein.
 
     0.684
AKB65011.1
Mobile element protein.
 
     0.684
AKB64379.1
Hypothetical protein.
 
     0.594
AKB64877.1
Hypothetical protein.
 
     0.594
AKB65031.1
Transposase.
 
     0.594
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.