STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63766.1Threonine dehydrogenase and related Zn-dependent dehydrogenase. (446 aa)    
Predicted Functional Partners:
fae-hps
Formaldehyde activating enzyme; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family.
    
 0.911
AKB66053.1
Ferredoxin.
  
  
  0.911
AKB65897.1
Formylmethanofuran dehydrogenase subunit A.
     
 0.901
AKB65898.1
Formylmethanofuran dehydrogenase subunit C.
    
  0.901
AKB66261.1
Hypothetical protein.
    
  0.901
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
    
  0.901
AKB66298.1
Formylmethanofuran dehydrogenase subunit A.
     
 0.901
AKB66300.1
FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
    
  0.901
AKB64464.1
Formylmethanofuran dehydrogenase subunit D.
     
  0.900
AKB64465.1
Formylmethanofuran dehydrogenase subunit B.
     
  0.900
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.