STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63804.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
AKB63803.1
COG1779: C4-type Zn finger.
 
     0.953
AKB65913.1
Hypothetical protein.
  
  
 0.794
AKB63805.1
tRNA-guanine(15) transglycosylase.
       0.773
AKB66069.1
Hypothetical protein.
  
    0.758
AKB63592.1
Hypothetical protein.
  
     0.751
AKB64051.1
Hypothetical protein.
  
  
 0.732
AKB63858.1
Oligosaccharyl transferase.
  
     0.726
AKB63859.1
Oligosaccharyl transferase.
  
     0.723
AKB66458.1
Archaeosortase A.
 
     0.723
AKB65728.1
Hypothetical protein.
 
     0.719
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.