STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63806.1Putative permease. (386 aa)    
Predicted Functional Partners:
AKB63807.1
Multidrug resistance protein B.
 
    
0.527
thyA
Thymidylate synthase; May catalyze the biosynthesis of dTMP using an unknown cosubstrate; Belongs to the thymidylate synthase family. Archaeal-type ThyA subfamily.
 
  
 0.492
AKB63804.1
Hypothetical protein.
 
     0.492
AKB63805.1
tRNA-guanine(15) transglycosylase.
       0.481
AKB66313.1
Hypothetical protein.
 
     0.474
AKB66312.1
Hypothetical protein.
 
     0.473
AKB65071.1
Membrane protein, putative.
  
     0.456
AKB63675.1
Hypothetical protein.
 
  
 0.454
AKB63803.1
COG1779: C4-type Zn finger.
 
   
 0.444
AKB66311.1
Transporter, RND superfamily.
 
     0.444
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.