STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63807.1Multidrug resistance protein B. (377 aa)    
Predicted Functional Partners:
AKB63675.1
Hypothetical protein.
 
  
 0.579
AKB64174.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
   
 0.546
AKB63806.1
Putative permease.
 
    
0.527
AKB66312.1
Hypothetical protein.
 
     0.511
AKB66313.1
Hypothetical protein.
 
     0.506
AKB65449.1
Hypothetical protein.
 
    0.497
AKB66020.1
Hypothetical protein.
  
     0.457
AKB64761.1
Transcriptional regulator, MarR family.
 
   
 0.456
AKB63804.1
Hypothetical protein.
 
     0.454
AKB66153.1
Hypothetical protein.
 
    0.445
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.