STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63807.1Multidrug resistance protein B. (377 aa)    
Predicted Functional Partners:
AKB63675.1
Hypothetical protein.
 
  
 0.576
AKB64174.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.531
AKB63806.1
Putative permease.
 
    
0.527
AKB66312.1
Hypothetical protein.
 
     0.511
AKB66313.1
Hypothetical protein.
 
     0.506
AKB65449.1
Hypothetical protein.
 
    0.495
AKB63925.1
Hypothetical protein.
 
   
 0.470
thyA
Thymidylate synthase; May catalyze the biosynthesis of dTMP using an unknown cosubstrate; Belongs to the thymidylate synthase family. Archaeal-type ThyA subfamily.
 
  
 0.466
AKB66020.1
Hypothetical protein.
  
     0.457
AKB63804.1
Hypothetical protein.
 
     0.454
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.