STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63845.1Glutamate synthase [NADPH] small chain. (469 aa)    
Predicted Functional Partners:
AKB63532.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 0.999
AKB63533.1
Glutamine amidotransferase, class-II.
  
 0.999
AKB63846.1
Putative electron-transfer protein.
 0.998
pyrD
Dihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
 0.995
AKB64141.1
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.986
AKB64585.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.986
AKB65898.1
Formylmethanofuran dehydrogenase subunit C.
  
 0.983
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
  
 0.983
AKB63535.1
Glutamine synthetase type I.
  
 
 0.981
AKB64698.1
Glutamine synthetase type I.
  
 
 0.977
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.