STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63855.1Glycosyltransferase. (354 aa)    
Predicted Functional Partners:
AKB63854.1
Glycosyltransferase.
 
 
 0.872
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.699
AKB63856.1
Glycosyl transferase, group 1.
    
0.699
AKB63857.1
Glycosyltransferase.
 
     0.621
AKB63323.1
Glycosyltransferase.
  
 0.579
AKB63337.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.536
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.519
AKB65666.1
Glycosyltransferase.
 
 
 0.519
AKB63361.1
Glycosyl transferase, family 2.
 
 
 0.518
AKB63314.1
UDP-glucose 4-epimerase.
 
 
 0.514
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.