STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63861.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
AKB66241.1
Biotin synthase-related enzyme.
 
     0.765
AKB65134.1
OB-fold nucleic acid binding domain protein.
 
     0.700
AKB65144.1
Putative phosphoglycerate mutase.
  
     0.676
AKB63548.1
Hypothetical protein.
  
     0.674
AKB63583.1
Alkylhydroperoxidase AhpD family core domain protein.
  
     0.673
AKB63859.1
Oligosaccharyl transferase.
 
     0.635
AKB65679.1
Hypothetical protein.
 
     0.627
AKB63618.1
PUA-PAPS reductase like fusion.
  
     0.611
AKB64580.1
PUA-PAPS reductase like fusion.
  
     0.611
AKB66069.1
Hypothetical protein.
  
     0.592
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.