STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63867.1Rubredoxin-oxygen oxidoreductase. (78 aa)    
Predicted Functional Partners:
AKB66076.1
Rubrerythrin.
 
  
 0.811
AKB63876.1
Hypothetical protein.
     
 0.776
AKB64236.1
Flavodoxin.
  
     0.730
AKB63873.1
Superoxide reductase.
  
  
 0.644
AKB65696.1
Rubrerythrin.
 
  
 0.619
AKB63869.1
Rubrerythrin.
     
 0.598
AKB64063.1
Thioredoxin.
  
  
 0.485
AKB63870.1
Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase.
 
     0.477
AKB64586.1
Rubredoxin; Belongs to the rubredoxin family.
 
  
 0.469
AKB63871.1
Hypothetical protein.
 
  
 0.463
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.