Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB63873.1Superoxide reductase. (163 aa)    
Predicted Functional Partners:
AKB64586.1
Rubredoxin; Belongs to the rubredoxin family.
 
  
 0.917
AKB63874.1
Protein-disulfide reductase.
  
  
 0.916
AKB65054.1
Hypothetical protein.
  
    0.907
AKB64130.1
Protein-disulfide reductase.
 
  
 0.874
AKB63872.1
Cytochrome c family protein.
       0.773
AKB63687.1
Alkyl hydroperoxide reductase subunit C-like protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.715
AKB63868.1
Hypothetical protein.
  
  
 0.675
AKB63867.1
Rubredoxin-oxygen oxidoreductase.
  
  
 0.644
AKB64699.1
Flavodoxin.
 
  
 0.637
AKB66426.1
Hypothetical protein.
       0.605
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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