STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63890.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
AKB63892.1
Hypothetical protein.
 
     0.875
AKB63891.1
Long-chain-fatty-acid--CoA ligase.
 
     0.837
AKB63893.1
NAD synthetase.
 
     0.601
AKB64185.1
Hypothetical protein.
  
     0.500
AKB66220.1
Hypothetical protein.
 
     0.480
AKB63894.1
Iron-sulfur cluster-binding protein.
 
     0.433
AKB66020.1
Hypothetical protein.
  
     0.428
AKB66470.1
Hypothetical protein.
  
     0.427
AKB65876.1
PQQ enzyme repeat domain protein.
  
     0.421
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.417
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.