rps27ae protein (Methanosarcina mazei) - STRING interaction network

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Score

rps27ae

SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family. (49 aa)

Predicted Functional Partners:

rps24e

0.998

spt4

0.988

rpl40e

0.983

AKB65386.1

0.972

rpl2

0.970

rpl29

0.966

rps6e

0.963

rps17e

0.962

rps19e

0.962

AKB65756.1

0.961

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65386.1	AKB65756.1	MSMAS_2190	MSMAS_2560	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.963
AKB65386.1	rpl2	MSMAS_2190	MSMAS_2557	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.980
AKB65386.1	rpl29	MSMAS_2190	MSMAS_2553	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.974
AKB65386.1	rpl40e	MSMAS_2190	MSMAS_0362	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.985
AKB65386.1	rps17e	MSMAS_2190	MSMAS_0112	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.979
AKB65386.1	rps19e	MSMAS_2190	MSMAS_0503	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.962
AKB65386.1	rps24e	MSMAS_2190	MSMAS_0710	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.929
AKB65386.1	rps27ae	MSMAS_2190	MSMAS_0709	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.972
AKB65386.1	rps6e	MSMAS_2190	MSMAS_2239	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.923
AKB65386.1	spt4	MSMAS_2190	MSMAS_0712	Putative Zn-ribbon RNA-binding protein with a function in translation.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.484
AKB65756.1	AKB65386.1	MSMAS_2560	MSMAS_2190	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Putative Zn-ribbon RNA-binding protein with a function in translation.	0.963
AKB65756.1	rpl2	MSMAS_2560	MSMAS_2557	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
AKB65756.1	rpl29	MSMAS_2560	MSMAS_2553	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.999
AKB65756.1	rpl40e	MSMAS_2560	MSMAS_0362	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.998
AKB65756.1	rps17e	MSMAS_2560	MSMAS_0112	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.993
AKB65756.1	rps19e	MSMAS_2560	MSMAS_0503	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.996
AKB65756.1	rps24e	MSMAS_2560	MSMAS_0710	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.994
AKB65756.1	rps27ae	MSMAS_2560	MSMAS_0709	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.961
AKB65756.1	rps6e	MSMAS_2560	MSMAS_2239	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.996
rpl2	AKB65386.1	MSMAS_2557	MSMAS_2190	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	Putative Zn-ribbon RNA-binding protein with a function in translation.	0.980