spt4 protein (Methanosarcina mazei) - STRING interaction network

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spt4

DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. (61 aa)

Predicted Functional Partners:

AKB63909.1

0.998

spt5

0.988

rps27ae

0.988

AKB63907.1

0.972

rps24e

0.966

rpoP

0.962

rpoA2

0.895

rpoH

0.888

AKB65620.1

0.888

AKB65619.1

0.885

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB63907.1	AKB63909.1	MSMAS_0711	MSMAS_0713	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	DNA-directed RNA polymerase subunit E'.	0.983
AKB63907.1	rps24e	MSMAS_0711	MSMAS_0710	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.994
AKB63907.1	rps27ae	MSMAS_0711	MSMAS_0709	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.959
AKB63907.1	spt4	MSMAS_0711	MSMAS_0712	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.972
AKB63907.1	spt5	MSMAS_0711	MSMAS_0290	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.585
AKB63909.1	AKB63907.1	MSMAS_0713	MSMAS_0711	DNA-directed RNA polymerase subunit E'.	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	0.983
AKB63909.1	AKB65619.1	MSMAS_0713	MSMAS_2423	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.968
AKB63909.1	AKB65620.1	MSMAS_0713	MSMAS_2424	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.980
AKB63909.1	rpoA2	MSMAS_0713	MSMAS_2425	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.984
AKB63909.1	rpoH	MSMAS_0713	MSMAS_2421	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.988
AKB63909.1	rpoP	MSMAS_0713	MSMAS_2082	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.	0.981
AKB63909.1	rps24e	MSMAS_0713	MSMAS_0710	DNA-directed RNA polymerase subunit E'.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.964
AKB63909.1	rps27ae	MSMAS_0713	MSMAS_0709	DNA-directed RNA polymerase subunit E'.	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.953
AKB63909.1	spt4	MSMAS_0713	MSMAS_0712	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.998
AKB63909.1	spt5	MSMAS_0713	MSMAS_0290	DNA-directed RNA polymerase subunit E'.	Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.958
AKB65619.1	AKB63909.1	MSMAS_2423	MSMAS_0713	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit E'.	0.968
AKB65619.1	AKB65620.1	MSMAS_2423	MSMAS_2424	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
AKB65619.1	rpoA2	MSMAS_2423	MSMAS_2425	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
AKB65619.1	rpoH	MSMAS_2423	MSMAS_2421	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.	0.998
AKB65619.1	rpoP	MSMAS_2423	MSMAS_2082	DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family.	0.946