spt4 protein (Methanosarcina mazei) - STRING interaction network

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Score

spt4

DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. (61 aa)

Predicted Functional Partners:

spt5

0.999

AKB63909.1

0.995

rps27ae

0.942

AKB63907.1

0.905

rps24e

0.879

AKB66052.1

0.853

AKB65620.1

0.775

rpoA2

0.733

eif1a

0.732

rps6e

0.725

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB63907.1	AKB63909.1	MSMAS_0711	MSMAS_0713	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	DNA-directed RNA polymerase subunit E'.	0.910
AKB63907.1	rps24e	MSMAS_0711	MSMAS_0710	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.971
AKB63907.1	rps27ae	MSMAS_0711	MSMAS_0709	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.857
AKB63907.1	rps6e	MSMAS_0711	MSMAS_2239	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.678
AKB63907.1	spt4	MSMAS_0711	MSMAS_0712	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.905
AKB63907.1	spt5	MSMAS_0711	MSMAS_0290	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.560
AKB63909.1	AKB63907.1	MSMAS_0713	MSMAS_0711	DNA-directed RNA polymerase subunit E'.	Hypothetical protein; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).	0.910
AKB63909.1	AKB65620.1	MSMAS_0713	MSMAS_2424	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.987
AKB63909.1	eif1a	MSMAS_0713	MSMAS_1307	DNA-directed RNA polymerase subunit E'.	Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.589
AKB63909.1	rpoA2	MSMAS_0713	MSMAS_2425	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
AKB63909.1	rps24e	MSMAS_0713	MSMAS_0710	DNA-directed RNA polymerase subunit E'.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.860
AKB63909.1	rps27ae	MSMAS_0713	MSMAS_0709	DNA-directed RNA polymerase subunit E'.	SSU ribosomal protein S27Ae; Belongs to the eukaryotic ribosomal protein eS31 family.	0.833
AKB63909.1	rps6e	MSMAS_0713	MSMAS_2239	DNA-directed RNA polymerase subunit E'.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.572
AKB63909.1	spt4	MSMAS_0713	MSMAS_0712	DNA-directed RNA polymerase subunit E'.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.995
AKB63909.1	spt5	MSMAS_0713	MSMAS_0290	DNA-directed RNA polymerase subunit E'.	Putative transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family.	0.714
AKB65620.1	AKB63909.1	MSMAS_2424	MSMAS_0713	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit E'.	0.987
AKB65620.1	eif1a	MSMAS_2424	MSMAS_1307	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.588
AKB65620.1	rpoA2	MSMAS_2424	MSMAS_2425	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
AKB65620.1	rps6e	MSMAS_2424	MSMAS_2239	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.411
AKB65620.1	spt4	MSMAS_2424	MSMAS_0712	DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit E'; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.	0.775