STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63917.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AKB63916.1
Hypothetical protein; Belongs to the UPF0179 family.
 
     0.860
AKB65521.1
Hypothetical protein.
  
     0.745
AKB64203.1
Replication protein A (two OB fold, one zinc finger).
  
     0.725
AKB63858.1
Oligosaccharyl transferase.
  
     0.720
AKB63859.1
Oligosaccharyl transferase.
  
     0.720
egsA
Glycerol-1-phosphate dehydrogenase [NAD(P)]; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea. Belongs to the glycerol-1-phosphate dehydrogenase family.
       0.715
AKB63252.1
Archaeal heat shock regulator, ArsR family.
  
     0.709
AKB65679.1
Hypothetical protein.
  
     0.703
AKB66458.1
Archaeosortase A.
  
     0.699
AKB63219.1
Archaeosine tRNA-ribosyltransferase type 2.
  
     0.698
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.