STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63925.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
hisC
Aspartate aminotransferase / Histidinol-phosphate aminotransferase.
    
 0.665
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.648
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
       0.539
tgtA
Archaeosine tRNA-ribosyltransferase type 1; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
    
  0.500
AKB64967.1
Hypothetical protein.
  
     0.491
AKB65876.1
PQQ enzyme repeat domain protein.
 
     0.481
AKB63807.1
Multidrug resistance protein B.
 
   
 0.470
AKB65225.1
Hypothetical protein.
  
     0.463
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.453
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
 
     0.446
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.