STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63925.1Hypothetical protein. (332 aa)    
Predicted Functional Partners:
hisC
Aspartate aminotransferase / Histidinol-phosphate aminotransferase.
    
 0.615
tgtA
Archaeosine tRNA-ribosyltransferase type 1; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs; Belongs to the archaeosine tRNA-ribosyltransferase family.
    
  0.602
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
  0.585
AKB64967.1
Hypothetical protein.
  
     0.491
AKB65876.1
PQQ enzyme repeat domain protein.
 
     0.482
AKB65225.1
Hypothetical protein.
  
     0.463
AKB63477.1
Iron-sulfur cluster-binding protein.
    
  0.457
AKB64589.1
Iron-sulfur cluster-binding protein.
    
  0.457
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.453
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
 
     0.446
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.