STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63927.1Transposase. (349 aa)    
Predicted Functional Partners:
AKB63926.1
Haloacid dehalogenase-like hydrolase.
       0.537
AKB65348.1
Mobile element protein.
  
     0.507
AKB64078.1
Mobile element protein.
  
     0.488
AKB65087.1
Hypothetical protein.
  
     0.438
AKB64113.1
Hypothetical protein.
  
     0.436
AKB65349.1
Mobile element protein.
 
  
 0.432
AKB64112.1
Hypothetical protein.
  
     0.426
AKB64077.1
Mobile element protein.
 
  
 0.402
AKB64390.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.