STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64013.1Ferredoxin. (64 aa)    
Predicted Functional Partners:
AKB64272.1
Molybdate-binding domain of ModE.
  
    0.718
AKB64014.1
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
       0.709
AKB64703.1
Ketoisovalerate oxidoreductase subunit VorB.
  
 
 0.603
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
    
 0.591
AKB63402.1
Iron-sulfur-binding protein.
  
 
 0.509
AKB64466.1
Tungsten-containing formylmethanofuran dehydrogenase 2 subunit G.
  
 
 0.495
AKB65265.1
Indolepyruvate oxidoreductase subunit IorB.
  
 
 0.490
AKB65787.1
Indolepyruvate oxidoreductase subunit IorB.
  
 
 0.490
AKB64012.1
Ferredoxin.
      
0.483
AKB66517.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
  
 
 0.454
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.