STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64033.1S-layer family duplication domain protein. (868 aa)    
Predicted Functional Partners:
AKB65144.1
Putative phosphoglycerate mutase.
  
     0.748
AKB66035.1
CoB--CoM heterodisulfide reductase 2 subunit E.
  
     0.729
AKB64124.1
Hypothetical protein.
  
     0.728
AKB64123.1
Hypothetical protein.
  
     0.724
AKB63548.1
Hypothetical protein.
  
     0.703
AKB65229.1
Membrane-associated protein.
  
     0.696
AKB65210.1
Phytoene dehydrogenase.
  
     0.682
AKB66312.1
Hypothetical protein.
  
     0.654
AKB64546.1
Phytoene dehydrogenase.
  
     0.636
AKB65230.1
Hypothetical protein.
  
     0.628
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.