STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64038.1ATPase component CbiO of energizing module of cobalt ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (453 aa)    
Predicted Functional Partners:
AKB64037.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
 
 0.998
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
 
 0.992
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.992
AKB63607.1
Substrate-specific component NikM of nickel ECF transporter.
 
 0.983
AKB63614.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.982
AKB63606.1
Additional substrate-specific component NikN of nickel ECF transporter.
  
 0.949
AKB63615.1
ATPase component NikO of energizing module of nickel ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
  
 
0.908
AKB64860.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.895
AKB65506.1
Transmembrane component of energizing module of predicted tryptophan ECF transporter.
 
 0.894
AKB63456.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 0.890
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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