Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB64086.1Flagella-related protein FlaH. (264 aa)    
Predicted Functional Partners:
AKB64088.1
Flagella-related protein FlaJ.
 
  
 0.980
AKB64087.1
Flagella-related protein FlaI.
 
  
 0.979
AKB64180.1
Flagella-related protein FlaJ.
 
  
 0.964
AKB64174.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.944
AKB64179.1
Flagella-related protein FlaI.
 
  
 0.863
AKB64081.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.789
AKB64173.1
Flagellin FlaB2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.788
AKB63564.1
Flagella-related protein FlaI.
 
  
 0.690
AKB66348.1
Type II secretion system protein.
 
  
 0.685
AKB64085.1
Hypothetical protein.
  
  
 0.655
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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