STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64092.1CoB--CoM heterodisulfide reductase subunit B. (100 aa)    
Predicted Functional Partners:
AKB63516.1
CoB--CoM heterodisulfide reductase subunit C.
 
 0.939
AKB64111.1
CoB--CoM heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
 
 0.894
AKB64841.1
Coenzyme F420 hydrogenase subunit alpha.
 
 0.886
AKB64844.1
Coenzyme F420 hydrogenase subunit beta.
 
 0.855
AKB64843.1
Coenzyme F420 hydrogenase subunit gamma.
 
 0.817
AKB64464.1
Formylmethanofuran dehydrogenase subunit D.
 
 
 
 0.762
AKB65895.1
Formylmethanofuran dehydrogenase (tungsten) subunit D.
 
 
 
 0.747
AKB63530.1
Coenzyme F420 hydrogenase subunit beta.
 
 0.739
AKB64469.1
Polyferredoxin protein MvhB.
 
 
 
 0.736
AKB63878.1
Coenzyme F420 hydrogenase subunit beta.
 
 0.733
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.