STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64112.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
AKB64208.1
Transcriptional regulator, ArsR family.
  
     0.724
AKB63592.1
Hypothetical protein.
  
     0.704
AKB63804.1
Hypothetical protein.
  
     0.698
AKB64868.1
Sterol-regulatory element-binding protein intramembrane protease.
  
     0.615
AKB65679.1
Hypothetical protein.
  
     0.581
AKB63858.1
Oligosaccharyl transferase.
  
     0.550
AKB66121.1
Hypothetical protein.
  
     0.548
AKB66069.1
Hypothetical protein.
  
     0.545
AKB63916.1
Hypothetical protein; Belongs to the UPF0179 family.
  
     0.544
AKB63859.1
Oligosaccharyl transferase.
  
     0.539
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.