STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64118.1Peptidyl-prolyl cis-trans isomerase. (160 aa)    
Predicted Functional Partners:
rps2
SSU ribosomal protein SAe (S2p); Belongs to the universal ribosomal protein uS2 family.
  
 
 0.749
rps3
SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 
 0.731
AKB65579.1
[NiFe] hydrogenase nickel incorporation-associated protein HypB.
    
 0.698
AKB65718.1
[NiFe] hydrogenase nickel incorporation-associated protein HypB.
    
 0.698
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
   
 
 0.602
AKB65573.1
Energy-conserving hydrogenase (ferredoxin), subunit E.
    
 
 0.590
rps10
SSU ribosomal protein S20e (S10p); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
 
    0.556
AKB64116.1
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
 
    
0.530
AKB64117.1
Peptidyl-prolyl cis-trans isomerase.
 
    
0.513
rps3ae
SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
    0.503
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.