Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB64132.1Ferredoxin. (122 aa)    
Predicted Functional Partners:
AKB64134.1
Hypothetical protein.
 
     0.885
AKB64135.1
Hypothetical protein.
  
    0.809
AKB64339.1
Hypothetical protein.
  
    0.738
AKB65133.1
Iron-sulfur flavoprotein.
 
    0.578
AKB64133.1
Hypothetical protein.
       0.575
AKB64259.1
Thymidylate synthase.
 
     0.567
AKB66283.1
Iron-sulfur flavoprotein.
 
    0.567
AKB64895.1
PPOX class probable F420-dependent enzyme.
   
    0.513
AKB65075.1
Putative flavin-nucleotide-binding protein.
   
    0.513
AKB63402.1
Iron-sulfur-binding protein.
  
    0.457
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.