STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64132.1Ferredoxin. (122 aa)    
Predicted Functional Partners:
AKB64135.1
Hypothetical protein.
  
    0.730
AKB64339.1
Hypothetical protein.
  
    0.629
AKB65133.1
Iron-sulfur flavoprotein.
 
    0.584
AKB64134.1
Hypothetical protein.
 
     0.580
AKB64133.1
Hypothetical protein.
       0.574
AKB66283.1
Iron-sulfur flavoprotein.
 
    0.573
AKB64895.1
PPOX class probable F420-dependent enzyme.
   
    0.518
AKB65075.1
Putative flavin-nucleotide-binding protein.
   
    0.518
AKB66437.1
Hypothetical protein.
 
    0.448
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
 
    0.424
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.