STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64135.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
AKB64132.1
Ferredoxin.
  
    0.809
AKB64134.1
Hypothetical protein.
 
     0.716
AKB63559.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
 
 0.562
AKB63402.1
Iron-sulfur-binding protein.
 
  
 0.538
AKB64991.1
4-carboxymuconolactone decarboxylase.
 
  
 0.504
AKB64769.1
Glycogen phosphorylase.
 
    0.498
AKB64990.1
Acetyltransferase, GNAT family.
 
 
 0.480
AKB65423.1
Ribosomal-protein-L7p-serine acetyltransferase.
 
 
 0.468
AKB64477.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.467
AKB64385.1
Carboxymuconolactone decarboxylase family protein.
 
  
 0.460
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.