STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64166.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
AKB64167.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
   
 
 0.929
AKB64165.1
Positive regulator of CheA protein activity (CheW).
     
 0.873
AKB66531.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
   
 
 0.782
AKB65029.1
Sensory transduction histidine kinase.
   
 
 0.771
AKB64172.1
Chemotaxis protein methyltransferase CheR.
     
 0.751
AKB64170.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
     
 0.745
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
     
 0.728
AKB64169.1
Signal transduction histidine kinase CheA.
     
 0.726
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
       0.714
AKB64164.1
Methyl-accepting chemotaxis protein.
     
 0.582
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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