STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64167.1Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY. (120 aa)    
Predicted Functional Partners:
AKB64170.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
 
 
 0.994
AKB64169.1
Signal transduction histidine kinase CheA.
 
 
 0.993
AKB64165.1
Positive regulator of CheA protein activity (CheW).
 
 0.991
AKB64164.1
Methyl-accepting chemotaxis protein.
 
 0.978
AKB66535.1
Chemotaxis protein CheC -- inhibitor of MCP methylation.
 
 
 0.977
AKB66533.1
Signal transduction histidine kinase CheA.
 
 
 0.976
AKB66528.1
Positive regulator of CheA protein activity (CheW).
 
 0.969
AKB66207.1
Methyl-accepting chemotaxis protein.
 
 0.961
AKB64166.1
Hypothetical protein.
   
 
 0.929
AKB66529.1
Methyl-accepting chemotaxis protein.
 
  
  0.926
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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