STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64180.1Flagella-related protein FlaJ. (541 aa)    
Predicted Functional Partners:
AKB64179.1
Flagella-related protein FlaI.
 
  
 0.971
AKB64174.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
 
  
 0.968
AKB64086.1
Flagella-related protein FlaH.
 
  
 0.964
AKB64178.1
Flagella-related protein FlaH.
 
  
 0.958
AKB64087.1
Flagella-related protein FlaI.
 
  
 0.916
AKB64173.1
Flagellin FlaB2; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.878
AKB64176.1
Hypothetical protein.
  
  
 0.838
AKB64081.1
Flagellin FlaB1; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.799
AKB64177.1
Hypothetical protein.
  
  
 0.794
AKB64181.1
Hypothetical protein.
       0.791
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.