STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64201.1Glycine betaine transport system, permease protein. (206 aa)    
Predicted Functional Partners:
AKB64198.1
L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.
 
 0.999
AKB64199.1
L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1.
 
 0.998
AKB64200.1
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
 
  
 
0.998
AKB64484.1
Glycine betaine ABC transport system, ATP-binding protein OpuAA.
 
 
 0.670
AKB65937.1
Glutamate transport membrane-spanning protein.
    
 0.480
AKB64202.1
Trk system potassium uptake protein TrkA.
     
 0.457
AKB65938.1
Glutamine ABC transporter, periplasmic glutamine-binding protein; TCDB 3.A.1.3.2.
    
 0.453
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.