STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64202.1Trk system potassium uptake protein TrkA. (612 aa)    
Predicted Functional Partners:
AKB65991.1
Na+/H+ antiporter.
 
   
 0.738
AKB63764.1
Hypothetical protein.
   
 
 0.631
AKB64424.1
Serine/threonine protein phosphatase BSU1.
   
 
 0.631
AKB66208.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
   
 
 0.631
AKB64268.1
Sodium/calcium exchanger protein.
 
 
 
 0.606
AKB65239.1
Sodium/calcium exchanger protein.
 
 
 
 0.600
AKB64004.1
Putative voltage-gated ClC-type chloride channel ClcB.
 
  
 0.584
AKB65531.1
GTPase Era.
 
 0.545
AKB65397.1
Potassium uptake protein TrkH.
 
 
 
 0.537
AKB65395.1
Potassium uptake protein TrkH.
 
 
 
 0.534
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.