STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64207.1MarR family protein. (262 aa)    
Predicted Functional Partners:
AKB64208.1
Transcriptional regulator, ArsR family.
 
     0.882
AKB65191.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase.
  
     0.684
AKB65530.1
Hypothetical protein.
  
     0.672
ef1b
Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
 
     0.621
AKB66027.1
DUF447 family protein.
  
     0.620
AKB65845.1
Orotate phosphoribosyltransferase related protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
     0.597
AKB65846.1
Hypothetical protein.
  
     0.595
AKB65913.1
Hypothetical protein.
  
     0.590
AKB64051.1
Hypothetical protein.
  
     0.588
AKB65728.1
Hypothetical protein.
  
     0.586
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.