STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64208.1Transcriptional regulator, ArsR family. (136 aa)    
Predicted Functional Partners:
AKB64207.1
MarR family protein.
 
     0.882
AKB64390.1
Hypothetical protein.
  
     0.731
AKB64113.1
Hypothetical protein.
  
     0.725
AKB64112.1
Hypothetical protein.
  
     0.724
AKB65087.1
Hypothetical protein.
  
     0.720
AKB66458.1
Archaeosortase A.
  
     0.685
AKB65728.1
Hypothetical protein.
  
     0.680
AKB63858.1
Oligosaccharyl transferase.
  
     0.648
AKB63859.1
Oligosaccharyl transferase.
  
     0.640
AKB66069.1
Hypothetical protein.
 
     0.638
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.