STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64215.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
AKB63707.1
Metallo-beta-lactamase family protein.
  
     0.593
AKB64414.1
Hypothetical protein.
  
     0.590
AKB64216.1
Hypothetical protein.
 
    
0.544
AKB66292.1
Hypothetical protein.
  
     0.531
AKB66121.1
Hypothetical protein.
  
     0.487
AKB64825.1
Hypothetical protein.
  
     0.485
AKB63374.1
Hypothetical protein.
  
     0.472
AKB66078.1
Hypothetical protein.
  
     0.456
AKB65225.1
Hypothetical protein.
  
     0.430
AKB65445.1
Hypothetical protein; Similar to cytochrome C-type biogenesis protein CcdA.
 
     0.421
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.