Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB64216.1Hypothetical protein. (110 aa)    
Predicted Functional Partners:
AKB64215.1
Hypothetical protein.
 
    
0.563
AKB64825.1
Hypothetical protein.
  
     0.544
AKB63707.1
Metallo-beta-lactamase family protein.
  
     0.446
AKB66333.1
Hypothetical protein.
  
     0.439
AKB65079.1
Hypothetical protein.
  
     0.432
AKB64848.1
Hypothetical protein.
  
     0.430
AKB66121.1
Hypothetical protein.
  
     0.425
AKB64395.1
Cysteate synthase; Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate.
 
     0.417
AKB64414.1
Hypothetical protein.
  
     0.409
AKB65375.1
Hypothetical protein.
 
     0.403
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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