STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64248.1Isf-3. (218 aa)    
Predicted Functional Partners:
AKB64249.1
Cell division protein FtsH.
       0.551
AKB63842.1
Nitroreductase family protein.
 
 
 0.487
AKB65687.1
5,10-methylenetetrahydromethanopterin reductase.
 
  
  0.453
AKB65991.1
Na+/H+ antiporter.
 
   
 0.452
AKB66281.1
Nitroreductase family protein.
 
 
 0.450
AKB65926.1
Catalase.
 
  
 0.427
mer
5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family.
 
  
  0.417
AKB65098.1
5,10-methylenetetrahydromethanopterin reductase.
 
  
  0.413
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.