STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64254.1Aspartate aminotransferase. (380 aa)    
Predicted Functional Partners:
AKB64128.1
Prephenate dehydratase.
 
 
 0.988
AKB63237.1
Prephenate and/or arogenate dehydrogenase (unknown specificity).
    
 0.960
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.953
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
  
 
 0.951
AKB66442.1
Aspartokinase; Belongs to the aspartokinase family.
 
 
 0.941
AKB64141.1
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.939
AKB64585.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.939
argJ
Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
    
 0.938
AKB66506.1
Asparagine synthetase (glutamine-hydrolyzing).
  
 
 0.935
hisC
Aspartate aminotransferase / Histidinol-phosphate aminotransferase.
 
 
0.934
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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