Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKB64272.1Molybdate-binding domain of ModE. (69 aa)    
Predicted Functional Partners:
AKB66286.1
Tungstate ABC transporter, permease protein WtpB.
  
 
 0.847
AKB63786.1
Molybdenum transport system permease protein ModB; TCDB 3.A.1.8.1.
 
  
 0.775
AKB64012.1
Ferredoxin.
  
    0.718
AKB64013.1
Ferredoxin.
  
    0.718
AKB66285.1
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA; TCDB 3.A.1.8.1.
 
  
 0.663
AKB63787.1
Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA; TCDB 3.A.1.8.1.
 
  
 0.660
AKB63714.1
V-type ATP synthase subunit K.
    
  0.599
AKB63559.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.598
AKB65092.1
Ribonucleotide reductase of class II (coenzyme B12-dependent); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
     
  0.593
AKB66302.1
ABC-type tungstate transport system, permease protein.
 
     0.447
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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