STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64296.1ATP-dependent DNA helicase. (454 aa)    
Predicted Functional Partners:
AKB66198.1
ATP-dependent DNA helicase RecG.
  
  
 
0.927
AKB64290.1
ATP-dependent DNA helicase.
  
     0.751
AKB64289.1
ATP-dependent DNA helicase.
 
     0.707
AKB64364.1
ATP-dependent DNA helicase.
  
     0.445
AKB64360.1
Putative ATPase (AAA+ superfamily).
 
     0.408
AKB64295.1
Hypothetical protein.
       0.404
AKB63749.1
EcoKI restriction-modification system protein HsdS.
 
    0.403
AKB64501.1
ATPase.
 
     0.401
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.