STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64310.13-oxoacyl-[acyl-carrier protein] reductase. (255 aa)    
Predicted Functional Partners:
AKB63631.1
Beta-ketoacyl synthase/thiolase.
  
 0.912
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
  
 
 0.856
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
  
 
 0.856
AKB64479.1
Putative ankyrin repeat protein.
  
 0.813
AKB65093.1
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.798
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
  
 
 0.792
mre11
DNA double-strand break repair protein Mre11; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family.
  
 
 0.781
AKB63632.1
Conserved protein associated with acetyl-CoA C-acyltransferase.
   
 0.705
AKB63291.1
ATP-dependent DNA helicase RecQ.
   
 
 0.667
AKB66342.1
Phosphomannomutase; Belongs to the phosphohexose mutase family.
 
 0.626
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.