STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB64333.1Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Includes in-frame UAG codon. (71 aa)    
Predicted Functional Partners:
AKB63214.1
Hypothetical protein.
  
 
 0.664
AKB65500.1
2,4-dienoyl-CoA reductase [NADPH].
  
 
 0.664
AKB63891.1
Long-chain-fatty-acid--CoA ligase.
    
 0.645
AKB65503.1
Long-chain-fatty-acid--CoA ligase.
    
 0.645
AKB63664.1
Aldehyde dehydrogenase.
  
 
 0.591
AKB64476.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.591
AKB65555.1
Succinate-semialdehyde dehydrogenase [NADP+].
  
 
 0.591
AKB64676.1
Transcriptional regulator, ArsR family.
     
 0.580
AKB64705.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
    
 0.555
AKB66282.1
Hypothetical protein.
    
  0.555
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.